STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
salYMacrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component. (394 aa)    
Predicted Functional Partners:
ACPL_5131
Methionine import ATP-binding protein metN; ABC-type sugar transport systems, ATPase components.
 
 0.994
ACPL_2929
ABC-type oligopeptide transport system, ATPase component.
 
 0.976
cusB
DNA-directed RNA polymerase subunit beta; Membrane-fusion protein.
 
 
 0.967
ACPL_4195
ABC-type sugar transport systems, ATPase components.
 
 0.965
ACPL_2324
Methionine import ATP-binding protein metN; ABC-type sugar transport systems, ATPase components.
 
 0.958
ACPL_4085
Lipoprotein-releasing system ATP-binding protein; ABC-type spermidine/putrescine transport systems, ATPase components.
 
 0.943
ACPL_2577
Methionine import ATP-binding protein metN; ABC-type sugar transport systems, ATPase components.
 
 0.904
ACPL_5255
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components.
 
 0.898
ACPL_989
ABC-type spermidine/putrescine transport systems, ATPase components.
 
 0.897
ACPL_3578
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components.
 
 0.894
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.