STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cusBDNA-directed RNA polymerase subunit beta; Membrane-fusion protein. (447 aa)    
Predicted Functional Partners:
salY
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
 
 
 0.967
ACPL_5131
Methionine import ATP-binding protein metN; ABC-type sugar transport systems, ATPase components.
 
 
 0.915
ACPL_2928
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
 
 
 0.809
ACPL_2325
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
 
 
 0.798
ACPL_5129
ywfM-like uncharacterized transporter; Predicted permease, DMT superfamily.
       0.773
ACPL_7473
Multidrug resistance protein mdtC; Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.679
ACPL_4196
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
 
 
 0.670
ACPL_5128
Putative signaling protein; FOG: GGDEF domain.
       0.653
ACPL_2322
Multidrug resistance protein mdtA; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.634
ACPL_2929
ABC-type oligopeptide transport system, ATPase component.
 
 
 0.621
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.