Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5152Uncharacterized protein conserved in bacteria. (249 aa)    
Predicted Functional Partners:
ACPL_5151
Hypothetical protein.
 
     0.813
chiB
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.736
chiA-2
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.693
chiC
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
   
 0.691
chiD
Chitinase; Belongs to the glycosyl hydrolase 18 family.
   
 0.685
chiD-2
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.682
chiA-3
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.594
ACPL_2584
Uncharacterized protein conserved in bacteria.
  
   
 0.583
chiA
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
   
 0.548
lieB
Leupeptin-inactivating enzyme 2; Zinc metalloprotease (elastase).
  
  
 0.543
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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