STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5155tRNA (cmo5U34)-methyltransferase; SAM-dependent methyltransferases. (275 aa)    
Predicted Functional Partners:
cobI
Precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase; Precorrin-3B methylase.
  
  
 0.916
cobE
Protein cobE; Cobalamin biosynthesis protein CbiG.
  
  
 0.913
cobM
Precorrin-4 methylase; Belongs to the precorrin methyltransferase family.
  
  
 0.707
cobH
precorrin-8X methylmutase; Precorrin isomerase.
  
  
 0.706
ACPL_6140
Trans-acting enoyl reductase.
 
     0.662
cysG
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase; Uroporphyrinogen-III methylase.
  
  
 0.579
cobF
precorrin-6A synthase; Uroporphyrinogen-III methylase.
  
  
 0.548
hemD
Uroporphyrinogen-III synthase.
  
  
 0.527
cobK
Precorrin-6x reductase.
  
  
 0.482
capD
Polysaccharide biosynthesis protein CapD; Predicted nucleoside-diphosphate sugar epimerases.
       0.450
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.