STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsJArylsulfatase A and related enzymes. (462 aa)    
Predicted Functional Partners:
ACPL_2486
Hypothetical protein.
 
   0.846
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.667
ACPL_5163
Hypothetical protein.
       0.655
acbR
1-epi-valienol-1, 7-bisphosphate-1-adenylyltransferase.
   
    0.550
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
   
    0.550
rhaD
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
 
 
 0.542
pks1B
Polyketide synthase modules and related proteins.
 
 
 0.524
pks2A
Polyketide synthase modules and related proteins.
  
 
 0.498
gno
Gluconate 5-dehydrogenase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
 0.490
ACPL_4175
Short chain dehydrogenase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
 0.486
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.