STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5171Transitional endoplasmic reticulum ATPase; ATPases of the AAA+ class. (482 aa)    
Predicted Functional Partners:
dnaK-3
Molecular chaperone.
 
 0.857
acuC
Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
   
 0.743
ytrE
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components.
  
     0.725
ACPL_1008
Lipid A export ATP-binding/permease protein msbA; ABC-type multidrug transport system, ATPase and permease components.
 
 
 0.693
ccmA
Spermidine/putrescine import ATP-binding protein potA; ABC-type spermidine/putrescine transport systems, ATPase components.
  
   0.688
lolD
Spermidine/putrescine import ATP-binding protein potA; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
     0.687
ACPL_989
ABC-type spermidine/putrescine transport systems, ATPase components.
  
     0.679
ACPL_375
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components.
  
     0.663
ACPL_6740
Methionine import ATP-binding protein metN 1; ABC-type oligopeptide transport system, ATPase component.
  
     0.642
ACPL_5172
Predicted aminopeptidases.
    
  0.620
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.