Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5175Hypothetical protein. (76 aa)    
Predicted Functional Partners:
potH
ABC-type spermidine/putrescine transport system, permease component I.
  
 0.935
potI
ABC-type spermidine/putrescine transport system, permease component II.
  
 0.924
gluD
ABC-type amino acid transport system, permease component.
   
 
 0.788
occM-2
ABC-type amino acid transport system, permease component.
   
 
 0.786
ACPL_8069
Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein).
  
 
  0.786
ACPL_2440
Uncharacterized protein; ABC-type cobalt transport system, permease component CbiQ and related transporters.
   
 
 0.782
ACPL_882
Peptide/nickel transport system substrate-binding protein; ABC-type dipeptide transport system, periplasmic component.
   
 
 0.782
msmK
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
 
  0.781
msiK
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
 
  0.781
ACPL_1435
Chelated iron transport system membrane protein yfeD; ABC-type Mn2+/Zn2+ transport systems, permease components.
     
 0.779
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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