STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5178Arsenical resistance operon repressor; Predicted transcriptional regulators. (199 aa)    
Predicted Functional Partners:
ACPL_5179
yndB-like uncharacterized protein.
    0.955
ACPL_5180
Uncharacterized protein conserved in bacteria.
       0.773
ACPL_2290
Transcriptional repressor sdpR; Predicted transcriptional regulators.
  
     0.760
ACPL_5200
Transcriptional repressor sdpR; Predicted transcriptional regulators.
  
     0.676
ACPL_1334
Predicted transcriptional regulators.
  
     0.624
ACPL_5257
Hypothetical protein.
 
    0.581
ACPL_5181
Hypothetical protein.
       0.559
ACPL_2289
Activator of HSP90 ATPase 1 family protein.
 
    0.467
bglC
Glycoside hydrolase family protein; Endoglucanase.
       0.438
ACPL_2789
Transcriptional regulator, ArsR family; Predicted transcriptional regulators.
  
     0.430
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.