Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5183Rhs family protein. (2086 aa)    
Predicted Functional Partners:
ACPL_5182
Hypothetical protein.
       0.773
ACPL_4965
Hypothetical protein.
  
     0.643
ACPL_2744
Permeases of the major facilitator superfamily.
  
     0.551
ACPL_4966
Hypothetical protein; FOG: PKD repeat.
  
     0.546
ACPL_995
ATP-dependent transcriptional regulator.
  
     0.527
ACPL_7721
Cortactin-binding protein 2; PPE-repeat proteins.
  
   0.516
ACPL_2538
Kinesin light chain; FOG: TPR repeat.
  
    0.490
ACPL_3795
GCN5-related N-acetyltransferase; Predicted acetyltransferase.
  
    0.486
ACPL_6803
Hypothetical protein.
  
     0.460
plb1
Phospholipase B1, membrane-associated.
  
    0.459
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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