STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sidFFe(3+)-citrate-binding protein yfmC; ABC-type Fe3+-citrate transport system, periplasmic component. (351 aa)    
Predicted Functional Partners:
fepD
Vitamin B12 import system permease protein btuC; ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.955
fepC
Iron complex transport system ATP-binding protein; ABC-type oligopeptide transport system, ATPase component.
 
 
 0.921
ACPL_425
Vitamin B12 import system permease protein btuC; ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 
 0.875
ACPL_426
Iron complex transport system ATP-binding protein; ABC-type sugar transport systems, ATPase components.
 
 
 0.847
fepG
Vitamin B12 import system permease protein btuC; ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.789
nrps1A
Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.634
nrps1B
Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.634
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.624
ACPL_8250
Hypothetical protein.
 
    0.611
alcC
Rhizobactin siderophore biosynthesis protein rhbF; Siderophore synthetase component.
 
   
 0.598
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.