STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5210Collagen alpha-1(VII) chain; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain. (421 aa)    
Predicted Functional Partners:
ACPL_5211
Oxoglutarate dehydrogenase inhibitor; FOG: FHA domain.
 
   
 0.963
ACPL_5209
Protein kinase and PP2C-like domain-containing protein; Serine/threonine protein phosphatase.
 
     0.953
ACPL_5208
Serine/threonine protein kinase.
 
    0.941
ACPL_5207
Hypothetical protein.
 
     0.917
ACPL_5205
Hypothetical protein.
 
     0.884
ACPL_5206
Membrane-bound lytic murein transglycosylase F; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
 
     0.745
ACPL_2866
Hypothetical protein.
 
     0.677
pheT
Phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.665
ACPL_5204
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
       0.427
ACPL_5212
Hypothetical protein.
       0.407
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.