STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5213Uncharacterized protein conserved in bacteria. (201 aa)    
Predicted Functional Partners:
ACPL_3714
Hypothetical protein.
  
     0.604
ACPL_5598
Hypothetical protein.
  
     0.597
ACPL_5214
Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family.
       0.570
ACPL_713
Hypothetical protein.
  
     0.559
ACPL_2347
Transcriptional regulator, PadR-like family; Predicted transcriptional regulators.
  
     0.526
ACPL_5215
Transcriptional regulator, TetR family; Transcriptional regulator.
 
     0.500
ACPL_3737
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog.
  
     0.477
ACPL_6877
Uncharacterized protein conserved in bacteria.
  
     0.475
ACPL_7500
Putative transcriptional regulator, ArsR family; DNA-binding HTH domain-containing proteins.
  
     0.465
ydeG
ydeG-like uncharacterized MFS-type transporter; Permeases of the major facilitator superfamily.
 
     0.461
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.