pafC protein (Actinoplanes sp. SE50110) - STRING interaction network

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Score

pafC

Proteasome accessory factor C; Predicted transcriptional regulator. (328 aa)

Predicted Functional Partners:

pafB

0.996

ACPL_5228

0.826

rpoB

0.810

rbpA-2

0.687

tatA

0.633

ACPL_5232

0.624

rpoZ

0.624

rpoC

0.578

hrdB

0.567

ACPL_4788

0.567

Your Current Organism:

Actinoplanes sp. SE50110

NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACPL_4788	pafC	ACPL_4788	ACPL_5229	Predicted transcriptional regulator.	Proteasome accessory factor C; Predicted transcriptional regulator.	0.567
ACPL_4788	rpoB	ACPL_4788	ACPL_773	Predicted transcriptional regulator.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.541
ACPL_4788	rpoC	ACPL_4788	ACPL_774	Predicted transcriptional regulator.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.522
ACPL_4788	rpoZ	ACPL_4788	ACPL_6468	Predicted transcriptional regulator.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.510
ACPL_5228	ACPL_5232	ACPL_5228	ACPL_5232	Hypothetical protein.	Hypothetical protein.	0.530
ACPL_5228	pafB	ACPL_5228	ACPL_5230	Hypothetical protein.	Proteasome accessory factor B; Predicted transcriptional regulator.	0.772
ACPL_5228	pafC	ACPL_5228	ACPL_5229	Hypothetical protein.	Proteasome accessory factor C; Predicted transcriptional regulator.	0.826
ACPL_5228	tatA	ACPL_5228	ACPL_5227	Hypothetical protein.	Sec-independent protein translocase protein tatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	0.507
ACPL_5232	ACPL_5228	ACPL_5232	ACPL_5228	Hypothetical protein.	Hypothetical protein.	0.530
ACPL_5232	pafB	ACPL_5232	ACPL_5230	Hypothetical protein.	Proteasome accessory factor B; Predicted transcriptional regulator.	0.624
ACPL_5232	pafC	ACPL_5232	ACPL_5229	Hypothetical protein.	Proteasome accessory factor C; Predicted transcriptional regulator.	0.624
ACPL_5232	tatA	ACPL_5232	ACPL_5227	Hypothetical protein.	Sec-independent protein translocase protein tatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.	0.465
hrdB	pafB	ACPL_1268	ACPL_5230	RNA polymerase principal sigma factor hrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Proteasome accessory factor B; Predicted transcriptional regulator.	0.567
hrdB	pafC	ACPL_1268	ACPL_5229	RNA polymerase principal sigma factor hrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Proteasome accessory factor C; Predicted transcriptional regulator.	0.567
hrdB	rbpA-2	ACPL_1268	ACPL_2796	RNA polymerase principal sigma factor hrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.	0.861
hrdB	rpoB	ACPL_1268	ACPL_773	RNA polymerase principal sigma factor hrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.976
hrdB	rpoC	ACPL_1268	ACPL_774	RNA polymerase principal sigma factor hrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.958
hrdB	rpoZ	ACPL_1268	ACPL_6468	RNA polymerase principal sigma factor hrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.920
pafB	ACPL_5228	ACPL_5230	ACPL_5228	Proteasome accessory factor B; Predicted transcriptional regulator.	Hypothetical protein.	0.772
pafB	ACPL_5232	ACPL_5230	ACPL_5232	Proteasome accessory factor B; Predicted transcriptional regulator.	Hypothetical protein.	0.624