STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bag-3IgA FC receptor; Outer membrane receptor proteins, mostly Fe transport. (228 aa)    
Predicted Functional Partners:
clpC
ATP-dependent Clp protease ATP-binding subunit clpC; ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family.
  
    0.539
ACPL_6563
Hypothetical protein.
  
     0.430
ACPL_2426
Peptidase S8 and S53 subtilisin kexin sedolisin; Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
  
     0.426
ACPL_3454
Hypothetical protein.
  
     0.417
ACPL_2440
Uncharacterized protein; ABC-type cobalt transport system, permease component CbiQ and related transporters.
  
     0.408
ACPL_5285
Hypothetical protein.
       0.401
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.