STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5344Hypothetical protein. (234 aa)    
Predicted Functional Partners:
ACPL_4241
Hypothetical protein.
  
     0.603
ACPL_5343
Hypothetical protein.
       0.528
ACPL_6753
Neuroendocrine convertase 1; Subtilisin-like serine proteases.
  
     0.520
amyA
Alpha amylase catalytic region; Glycosidases.
  
     0.510
ACPL_2033
1,4-alpha-glucan-branching enzyme; Glycosidases.
  
     0.500
nhaA
Na(+)/H(+) antiporter nhaA 1; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
   
    0.457
ACPL_5037
Uncharacterized protein conserved in bacteria.
  
     0.447
otsB
HAD family hydrolase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.442
ACPL_2989
Putative transcriptional regulator, MerR family.
  
     0.422
ACPL_5859
Collagen alpha-4(VI) chain; Type V secretory pathway, adhesin AidA.
  
     0.409
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.