Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACPL_5379Inositol 2-dehydrogenase; Predicted dehydrogenases and related proteins. (365 aa)    
Predicted Functional Partners:
ACPL_5382
Oxidoreductase domain protein; Predicted dehydrogenases and related proteins.
 
     0.876
ACPL_5378
Uncharacterized conserved protein, contains double-stranded beta-helix domain.
  
    0.778
ACPL_5384
ABC-type sugar transport system, periplasmic component.
 
     0.772
ACPL_8194
Putative endonuclease 4; Sugar phosphate isomerases/epimerases.
 
  
 0.734
ACPL_8196
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase; Predicted dehydrogenases and related proteins.
  
     0.718
iolE
Inosose dehydratase; Sugar phosphate isomerases/epimerases.
 
 
 0.692
uxaC
Glucuronate isomerase.
 
     0.640
ACPL_8195
Hypothetical protein.
 
   
 0.629
pel
Pectate lyase/Amb allergen; Pectate lyase.
 
     0.614
ACPL_5385
Putative ABC transporter permease protein yesP; ABC-type sugar transport systems, permease components.
 
     0.572
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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