STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_538Uncharacterized protein. (273 aa)    
Predicted Functional Partners:
ACPL_125
Uncharacterized protein.
  
     0.749
ACPL_1534
Uncharacterized protein.
  
     0.694
mqnB
Hypothetical protein; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2).
       0.673
ACPL_537
Uncharacterized protein; Permeases of the major facilitator superfamily.
       0.673
ACPL_7111
Hypothetical protein.
  
     0.663
ACPL_405
Phosphoglycerate mutase; Fructose-2,6-bisphosphatase.
  
     0.630
ACPL_481
Type II secretion system protein; Flp pilus assembly protein TadC.
  
     0.601
rbpA-2
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
  
     0.589
ACPL_1646
Transcriptional regulatory protein ompR; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
     0.573
ACPL_547
Uncharacterized protein.
  
     0.540
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.