STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxuBFructuronate reductase; Mannitol-1-phosphate/altronate dehydrogenases. (484 aa)    
Predicted Functional Partners:
uxaC
Glucuronate isomerase.
 
 
 0.998
fruB
PTS system, mannitol-specific IIA component; Mannitol/fructose-specific phosphotransferase system, IIA domain.
  
  
 0.912
mtlA-2
Phosphotransferase system, mannitol-specific IIBC component.
  
  
 0.860
mtlA
Phosphotransferase system, mannitol-specific IIBC component.
  
  
 0.842
ACPL_5382
Oxidoreductase domain protein; Predicted dehydrogenases and related proteins.
 
   
 0.840
garD
Altronate dehydratase.
 
  
 0.822
ACPL_5383
Transcriptional regulators.
 
   
 0.625
ACPL_5384
ABC-type sugar transport system, periplasmic component.
 
    0.593
spaA
Cell surface antigen I/II; FOG: Glucan-binding domain (YG repeat).
 
     0.590
ACPL_5379
Inositol 2-dehydrogenase; Predicted dehydrogenases and related proteins.
     
 0.566
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.