Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
uxaCGlucuronate isomerase. (469 aa)    
Predicted Functional Partners:
uxuB
Fructuronate reductase; Mannitol-1-phosphate/altronate dehydrogenases.
 
 
 0.998
garD
Altronate dehydratase.
 
  
 0.878
ACPL_5382
Oxidoreductase domain protein; Predicted dehydrogenases and related proteins.
 
     0.830
abfA
alpha-N-arabinofuranosidase; Alpha-L-arabinofuranosidase.
   
 
 0.820
ACPL_3008
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
    
 0.819
ugd
UDPglucose 6-dehydrogenase; UDP-N-acetyl-D-mannosaminuronate dehydrogenase.
     
  0.800
ACPL_2739
alpha-L-arabinofuranosidase B catalytic.
     
  0.800
udgA
Predicted UDP-glucose 6-dehydrogenase.
     
  0.800
ACPL_3607
ADP-L-glycero-D-manno-heptose-6-epimerase; Nucleoside-diphosphate-sugar epimerases.
     
  0.800
ACPL_4729
alpha-L-arabinofuranosidase B catalytic; O-Glycosyl hydrolase.
     
  0.800
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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