STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5397Fatty acid desaturase. (384 aa)    
Predicted Functional Partners:
ACPL_5396
Oxidoreductase FAD-binding domain protein; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
 0.999
ACPL_5395
Uncharacterized protein; Regulator of polyketide synthase expression.
 
     0.797
alkB
Alkane 1-monooxygenase.
  
     0.613
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.606
ACPL_4461
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
   
 0.530
ACPL_6759
Transcriptional regulator.
  
    0.516
ACPL_5499
Acyl dehydratase.
  
   
 0.498
fabG-4
3-ketoacyl-(acyl-carrier-protein) reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
 
 0.490
ACPL_684
Hypothetical protein.
  
     0.479
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
      
 0.465
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.