STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uspCuspC-like extracellular binding protein; ABC-type sugar transport system, periplasmic component. (411 aa)    
Predicted Functional Partners:
uspA
ABC-type sugar transport systems, permease components.
 
 0.999
uspB
uspB-like inner membrane ABC transporter permease protein; ABC-type sugar transport system, permease component.
 
 
 0.961
bglY
6-phospho-beta-glucosidase; Alpha-galactosidases/6-phospho-beta- glucosidases, family 4 of glycosyl hydrolases.
 
     0.843
ACPL_5407
PfkB domain protein; Sugar kinases, ribokinase family.
 
    0.821
ACPL_5385
Putative ABC transporter permease protein yesP; ABC-type sugar transport systems, permease components.
 
   0.707
ACPL_2153
ABC-type sugar transport systems, permease components.
 
 
 0.679
ACPL_5408
Hypothetical protein.
       0.636
ACPL_2154
ABC-type sugar transport system, permease component.
 
 
 0.626
ACPL_6725
Putative ABC transporter permease protein yesQ; ABC-type sugar transport system, permease component.
 
 
 0.623
acbG
ABC transporter membrane protein.
 
 
 0.619
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.