Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
uspCuspC-like extracellular binding protein; ABC-type sugar transport system, periplasmic component. (411 aa)    
Predicted Functional Partners:
uspA
ABC-type sugar transport systems, permease components.
 
 0.998
uspB
uspB-like inner membrane ABC transporter permease protein; ABC-type sugar transport system, permease component.
 
 0.966
msmK
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
 0.912
msiK
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
 0.912
malF
ABC-type sugar transport systems, permease components.
   
  0.867
bglY
6-phospho-beta-glucosidase; Alpha-galactosidases/6-phospho-beta- glucosidases, family 4 of glycosyl hydrolases.
 
     0.842
ACPL_2191
Periplasmic oligopeptide-binding protein; ABC-type dipeptide transport system, periplasmic component.
  
  
 0.821
ACPL_5407
PfkB domain protein; Sugar kinases, ribokinase family.
 
    0.820
yurO
yurO-like uncharacterized ABC transporter extracellular-binding protein; ABC-type sugar transport system, periplasmic component.
  
  
  0.805
ACPL_5384
ABC-type sugar transport system, periplasmic component.
  
  
 0.803
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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