STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5409Hypothetical protein. (208 aa)    
Predicted Functional Partners:
ACPL_5408
Hypothetical protein.
       0.567
ACPL_8212
Hypothetical protein; Transposase and inactivated derivatives, IS30 family.
  
     0.562
prsR-4
Putative anti-sigma regulatory factor, serine/threonine protein kinase.
  
     0.547
ACPL_5407
PfkB domain protein; Sugar kinases, ribokinase family.
 
     0.544
ACPL_3517
Anti-sigma F factor; FOG: PAS/PAC domain.
  
     0.540
ACPL_3895
Putative anti-sigma regulatory factor, serine/threonine protein kinase.
  
     0.540
ACPL_8213
Hypothetical protein.
  
     0.522
ACPL_4065
Hypothetical protein.
  
 
   0.497
ACPL_1601
Hypothetical protein.
  
     0.491
prsR-3
Anti-sigma F factor; Signal transduction histidine kinase.
  
     0.480
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.