STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5428Transcriptional regulators. (343 aa)    
Predicted Functional Partners:
ACPL_5426
ABC-type sugar transport systems, permease components.
       0.749
ACPL_5427
Putative ABC transporter permease protein yurM; ABC-type sugar transport system, permease component.
       0.749
nrps1A
Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins.
    
 
 0.623
nrps1B
Non-ribosomal peptide synthetase modules and related proteins.
    
 
 0.623
ACPL_5425
Putative arabinose-binding protein; ABC-type sugar transport system, periplasmic component.
 
   
 0.620
gltB
Glutamate synthase domain 2.
    
 
 0.618
yvfO
Arabinogalactan endo-1,4-beta-galactosidase.
       0.531
yvfO-2
Arabinogalactan endo-1,4-beta-galactosidase.
       0.461
hpr
Phosphotransferase system, HPr-related proteins.
 
 
 
 0.403
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.