Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACPL_5428Transcriptional regulators. (343 aa)    
Predicted Functional Partners:
ACPL_5426
ABC-type sugar transport systems, permease components.
       0.743
ACPL_5427
Putative ABC transporter permease protein yurM; ABC-type sugar transport system, permease component.
       0.743
nrps1A
Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins.
    
 
 0.699
nrps1B
Non-ribosomal peptide synthetase modules and related proteins.
    
 
 0.699
gltB
Glutamate synthase domain 2.
    
 
 0.619
ACPL_5425
Putative arabinose-binding protein; ABC-type sugar transport system, periplasmic component.
 
   
 0.617
yvfO
Arabinogalactan endo-1,4-beta-galactosidase.
       0.530
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
    
 
 0.466
yvfO-2
Arabinogalactan endo-1,4-beta-galactosidase.
       0.461
tycC
Non-ribosomal peptide synthetase modules and related proteins.
    
 
 0.449
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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