Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yvfOArabinogalactan endo-1,4-beta-galactosidase. (352 aa)    
Predicted Functional Partners:
abnA
Arabinan endo-1,5-alpha-L-arabinosidase; Beta-xylosidase.
  
   
 0.698
yvfO-2
Arabinogalactan endo-1,4-beta-galactosidase.
 
    
0.663
celA
Endoglucanase.
 
  
 0.650
xlnB
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
   
 0.641
ACPL_3008
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
   
 0.632
ACPL_5424
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
 
  
 0.607
ACPL_5426
ABC-type sugar transport systems, permease components.
 
    0.605
ACPL_495
Endo-1,4-beta-xylanase; Beta-1,4-xylanase.
  
     0.597
ACPL_4729
alpha-L-arabinofuranosidase B catalytic; O-Glycosyl hydrolase.
  
     0.594
ACPL_6130
Glycoside hydrolase family protein; Endoglucanase.
 
  
 0.593
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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