STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5431Hypothetical protein. (331 aa)    
Predicted Functional Partners:
ACPL_5432
Uncharacterized protein; Predicted transcriptional regulators.
 
     0.892
ACPL_5433
Putative membrane protein mmpL3; Predicted drug exporters of the RND superfamily.
  
 
 0.601
ACPL_7850
Hypothetical protein.
 
 
 0.574
ACPL_1393
Collagen alpha-5(VI) chain; PPE-repeat proteins.
  
     0.515
ACPL_5434
HTH-type protein slmA; Transcriptional regulator.
       0.511
ACPL_3810
Hypothetical protein.
  
     0.490
ACPL_4817
YD repeat-containing protein; Autotransporter adhesin.
  
     0.483
ACPL_6751
YD repeat-containing protein; Predicted membrane protein.
  
     0.479
prpH
Serine/threonine protein phosphatase.
  
 
 0.476
ACPL_8017
YD repeat-containing protein; Uncharacterized protein involved in chromosome partitioning.
  
     0.476
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.