Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACPL_5474Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (318 aa)    
Predicted Functional Partners:
putA
NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
 
   
 0.696
ACPL_4081
ywbI-like uncharacterized HTH-type transcriptional regulator; Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.590
gltB
Glutamate synthase domain 2.
     
 0.503
metR
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.454
ACPL_6214
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.416
ACPL_681
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.416
ACPL_3892
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.411
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.410
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.401
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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