STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5487Acetoacetate decarboxylase. (219 aa)    
Predicted Functional Partners:
ACPL_5488
Methyl-accepting chemotaxis protein.
       0.710
ACPL_4776
Hypothetical protein.
  
     0.622
ACPL_646
Hypothetical protein.
  
     0.599
dhaL
Dihydroxyacetone kinase, C-terminal domain protein; Dihydroxyacetone kinase.
       0.546
dak1
Dihydroxyacetone kinase, N-terminal domain protein; Dihydroxyacetone kinase.
       0.546
ACPL_430
Leucine rich repeat variant; Predicted NTPase (NACHT family).
  
     0.533
ACPL_644
Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
  
     0.488
ACPL_2564
Predicted flavoprotein involved in K+ transport.
  
     0.466
fadB
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; 3-hydroxyacyl-CoA dehydrogenase.
 
   
 0.449
ACPL_2457
Laminin subunit alpha-2.
  
     0.429
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.