STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5499Acyl dehydratase. (310 aa)    
Predicted Functional Partners:
fabG-4
3-ketoacyl-(acyl-carrier-protein) reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
 0.982
ACPL_5497
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.954
fadB
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; 3-hydroxyacyl-CoA dehydrogenase.
 
 0.827
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.659
ACPL_2565
Transcriptional regulator, TetR family; Transcriptional regulator.
  
     0.629
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
   
 
 0.580
ACPL_4462
Phosphoglycerate mutase 1.
  
     0.575
fadB-2
3-hydroxyacyl-CoA dehydrogenase.
  
 0.565
ACPL_5396
Oxidoreductase FAD-binding domain protein; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
  
 0.556
ACPL_6759
Transcriptional regulator.
  
     0.555
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.