ACPL_5511 protein (Actinoplanes sp. SE50110)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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co-expression

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[Homology]

Score

ACPL_5511

Nuclease. (189 aa)

Predicted Functional Partners:

ACPL_5512

0.561

ACPL_2644

0.539

rpsL

0.493

ACPL_3127

0.464

rplR

0.463

rpsE

0.463

ACPL_2820

0.457

rpsP

0.457

rplW

0.452

ACPL_6569

0.451

Your Current Organism:

Actinoplanes sp. SE50110

NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACPL_2644	ACPL_5511	ACPL_2644	ACPL_5511	Hypothetical protein.	Nuclease.	0.539
ACPL_2820	ACPL_5511	ACPL_2820	ACPL_5511	Protein tolB.	Nuclease.	0.457
ACPL_3127	ACPL_5511	ACPL_3127	ACPL_5511	Protein tolB; Periplasmic component of the Tol biopolymer transport system.	Nuclease.	0.464
ACPL_5511	ACPL_2644	ACPL_5511	ACPL_2644	Nuclease.	Hypothetical protein.	0.539
ACPL_5511	ACPL_2820	ACPL_5511	ACPL_2820	Nuclease.	Protein tolB.	0.457
ACPL_5511	ACPL_3127	ACPL_5511	ACPL_3127	Nuclease.	Protein tolB; Periplasmic component of the Tol biopolymer transport system.	0.464
ACPL_5511	ACPL_5512	ACPL_5511	ACPL_5512	Nuclease.	Regulator of nonsense transcripts-like protein; Superfamily I DNA and RNA helicases and helicase subunits.	0.561
ACPL_5511	ACPL_6569	ACPL_5511	ACPL_6569	Nuclease.	beta-N-acetylhexosaminidase; Beta-glucosidase-related glycosidases.	0.451
ACPL_5511	rplR	ACPL_5511	ACPL_798	Nuclease.	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.463
ACPL_5511	rplW	ACPL_5511	ACPL_784	Nuclease.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.452
ACPL_5511	rpsE	ACPL_5511	ACPL_799	Nuclease.	30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.463
ACPL_5511	rpsL	ACPL_5511	ACPL_777	Nuclease.	30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.	0.493
ACPL_5511	rpsP	ACPL_5511	ACPL_7281	Nuclease.	Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.457
ACPL_5512	ACPL_5511	ACPL_5512	ACPL_5511	Regulator of nonsense transcripts-like protein; Superfamily I DNA and RNA helicases and helicase subunits.	Nuclease.	0.561
ACPL_6569	ACPL_5511	ACPL_6569	ACPL_5511	beta-N-acetylhexosaminidase; Beta-glucosidase-related glycosidases.	Nuclease.	0.451
rplR	ACPL_5511	ACPL_798	ACPL_5511	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	Nuclease.	0.463
rplR	rplW	ACPL_798	ACPL_784	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.998
rplR	rpsE	ACPL_798	ACPL_799	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.999
rplR	rpsL	ACPL_798	ACPL_777	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.	0.997
rplR	rpsP	ACPL_798	ACPL_7281	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.995