STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5511Nuclease. (189 aa)    
Predicted Functional Partners:
ACPL_5512
Regulator of nonsense transcripts-like protein; Superfamily I DNA and RNA helicases and helicase subunits.
       0.561
ACPL_5513
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Thioredoxin reductase.
     
 0.473
ACPL_3127
Protein tolB; Periplasmic component of the Tol biopolymer transport system.
 
 
 0.463
ACPL_2820
Protein tolB.
 
 
 0.451
gltB
Glutamate synthase domain 2.
     
 0.445
ACPL_6569
beta-N-acetylhexosaminidase; Beta-glucosidase-related glycosidases.
 
  
 0.434
ACPL_1230
Hypothetical protein; Rhodanese-related sulfurtransferase.
  
    0.428
rbfA
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.
  
  
 0.426
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.