STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5518alpha-N-arabinofuranosidase; Alpha-L-arabinofuranosidase. (819 aa)    
Predicted Functional Partners:
ACPL_5519
alpha-N-arabinofuranosidase; Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
   
 0.934
ACPL_3369
Hypothetical protein; FOG: PKD repeat.
  
 0.803
abnA
Arabinan endo-1,5-alpha-L-arabinosidase; Beta-xylosidase.
 
  
 0.750
ACPL_5520
Putative PAS/PAC sensor protein; FOG: PAS/PAC domain.
       0.640
xysA
Endo-1,4-beta-xylanase; Beta-1,4-xylanase.
 
   
 0.627
ACPL_3660
Glycoside hydrolase family protein; Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
   
 0.580
ACPL_495
Endo-1,4-beta-xylanase; Beta-1,4-xylanase.
 
   
 0.572
ACPL_3003
Beta-1,4-xylanase.
  
     0.562
ACPL_5494
Endo-1,4-beta-xylanase; Beta-1,4-xylanase.
 
   
 0.552
glcI
Glucan endo-1,3-beta-glucosidase; Uncharacterized protein conserved in bacteria.
 
   
 0.551
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.