Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACPL_5559 | ACPL_5560 | ACPL_5559 | ACPL_5560 | Nuclease (SNase domain protein). | Lipid A export ATP-binding/permease protein msbA; ABC-type multidrug transport system, ATPase and permease components. | 0.554 |
ACPL_5559 | ACPL_5561 | ACPL_5559 | ACPL_5561 | Nuclease (SNase domain protein). | Lipid A export ATP-binding/permease protein msbA; ABC-type multidrug transport system, ATPase and permease components. | 0.554 |
ACPL_5559 | ACPL_5678 | ACPL_5559 | ACPL_5678 | Nuclease (SNase domain protein). | Hypothetical protein; Sterol desaturase. | 0.431 |
ACPL_5559 | ACPL_910 | ACPL_5559 | ACPL_910 | Nuclease (SNase domain protein). | Membrane protein involved in the export of O-antigen and teichoic acid. | 0.454 |
ACPL_5559 | gltB | ACPL_5559 | ACPL_1813 | Nuclease (SNase domain protein). | Glutamate synthase domain 2. | 0.456 |
ACPL_5559 | rnpA | ACPL_5559 | ACPL_8384 | Nuclease (SNase domain protein). | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.593 |
ACPL_5559 | wcnA | ACPL_5559 | ACPL_5246 | Nuclease (SNase domain protein). | Putative peptidoglycan O-acetyltransferase yrhL; Predicted acyltransferases. | 0.405 |
ACPL_5560 | ACPL_5559 | ACPL_5560 | ACPL_5559 | Lipid A export ATP-binding/permease protein msbA; ABC-type multidrug transport system, ATPase and permease components. | Nuclease (SNase domain protein). | 0.554 |
ACPL_5560 | ACPL_5561 | ACPL_5560 | ACPL_5561 | Lipid A export ATP-binding/permease protein msbA; ABC-type multidrug transport system, ATPase and permease components. | Lipid A export ATP-binding/permease protein msbA; ABC-type multidrug transport system, ATPase and permease components. | 0.824 |
ACPL_5561 | ACPL_5559 | ACPL_5561 | ACPL_5559 | Lipid A export ATP-binding/permease protein msbA; ABC-type multidrug transport system, ATPase and permease components. | Nuclease (SNase domain protein). | 0.554 |
ACPL_5561 | ACPL_5560 | ACPL_5561 | ACPL_5560 | Lipid A export ATP-binding/permease protein msbA; ABC-type multidrug transport system, ATPase and permease components. | Lipid A export ATP-binding/permease protein msbA; ABC-type multidrug transport system, ATPase and permease components. | 0.824 |
ACPL_5678 | ACPL_5559 | ACPL_5678 | ACPL_5559 | Hypothetical protein; Sterol desaturase. | Nuclease (SNase domain protein). | 0.431 |
ACPL_910 | ACPL_5559 | ACPL_910 | ACPL_5559 | Membrane protein involved in the export of O-antigen and teichoic acid. | Nuclease (SNase domain protein). | 0.454 |
gltB | ACPL_5559 | ACPL_1813 | ACPL_5559 | Glutamate synthase domain 2. | Nuclease (SNase domain protein). | 0.456 |
rnpA | ACPL_5559 | ACPL_8384 | ACPL_5559 | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | Nuclease (SNase domain protein). | 0.593 |
wcnA | ACPL_5559 | ACPL_5246 | ACPL_5559 | Putative peptidoglycan O-acetyltransferase yrhL; Predicted acyltransferases. | Nuclease (SNase domain protein). | 0.405 |