STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_556Hypothetical protein. (247 aa)    
Predicted Functional Partners:
ACPL_555
Acyl-CoA dehydrogenases.
       0.643
ACPL_554
Hypothetical protein; Transcription regulator of the Arc/MetJ class.
       0.602
ACPL_1135
Hypothetical protein.
  
     0.481
ACPL_7733
Hypothetical protein.
  
     0.457
yihR
Aldose 1-epimerase; Galactose mutarotase and related enzymes.
       0.451
ACPL_553
NADPH-dependent oxidoreductase; Nitroreductase.
       0.448
pdxH-2
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
       0.439
ACPL_551
Permeases of the major facilitator superfamily.
       0.430
ACPL_2444
Hypothetical protein; Signal transduction histidine kinase.
  
     0.403
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.