STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5560Lipid A export ATP-binding/permease protein msbA; ABC-type multidrug transport system, ATPase and permease components. (589 aa)    
Predicted Functional Partners:
ACPL_5561
Lipid A export ATP-binding/permease protein msbA; ABC-type multidrug transport system, ATPase and permease components.
 
    
0.824
nrps1A
Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.652
nrps1B
Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.652
dnaK-3
Molecular chaperone.
 
 0.644
ACPL_4303
Ribose import ATP-binding protein rbsA; ATPase components of various ABC-type transport systems, contain duplicated ATPase.
  
 
 
 0.644
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.639
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.573
ACPL_5559
Nuclease (SNase domain protein).
   
   0.554
ACPL_5171
Transitional endoplasmic reticulum ATPase; ATPases of the AAA+ class.
 
 
 0.545
ACPL_6195
Polyketide synthase modules and related proteins.
  
 
 0.545
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.