STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5563Sphingomyelin phosphodiesterase 2. (250 aa)    
Predicted Functional Partners:
ACPL_5859
Collagen alpha-4(VI) chain; Type V secretory pathway, adhesin AidA.
  
    0.725
ACPL_3541
Hypothetical protein.
  
    0.716
ACPL_2223
Hypothetical protein.
  
     0.701
ACPL_5000
Hypothetical protein.
  
     0.701
ACPL_5847
HtpX-like probable protease; Zn-dependent protease with chaperone function.
  
     0.682
ACPL_3992
Predicted membrane protein.
 
     0.665
ACPL_1555
Hypothetical protein.
  
     0.600
ACPL_6343
WD-40 repeat protein.
  
     0.598
ACPL_1393
Collagen alpha-5(VI) chain; PPE-repeat proteins.
  
     0.587
ACPL_1701
Fibrocystin-L; FOG: Ankyrin repeat.
  
     0.582
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.