Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACPL_3531 | ACPL_5567 | ACPL_3531 | ACPL_5567 | Hypothetical protein. | ADP-ribose 1''-phosphate phosphatase; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | 0.515 |
| ACPL_3531 | ACPL_7943 | ACPL_3531 | ACPL_7943 | Hypothetical protein. | Uncharacterized protein; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | 0.485 |
| ACPL_3531 | kptA | ACPL_3531 | ACPL_245 | Hypothetical protein. | Putative RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.480 |
| ACPL_5412 | ACPL_5567 | ACPL_5412 | ACPL_5567 | Uncharacterized protein conserved in bacteria. | ADP-ribose 1''-phosphate phosphatase; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | 0.517 |
| ACPL_5412 | ACPL_7468 | ACPL_5412 | ACPL_7468 | Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.447 |
| ACPL_5412 | ACPL_7943 | ACPL_5412 | ACPL_7943 | Uncharacterized protein conserved in bacteria. | Uncharacterized protein; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | 0.490 |
| ACPL_5412 | kptA | ACPL_5412 | ACPL_245 | Uncharacterized protein conserved in bacteria. | Putative RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.481 |
| ACPL_5567 | ACPL_3531 | ACPL_5567 | ACPL_3531 | ADP-ribose 1''-phosphate phosphatase; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | Hypothetical protein. | 0.515 |
| ACPL_5567 | ACPL_5412 | ACPL_5567 | ACPL_5412 | ADP-ribose 1''-phosphate phosphatase; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | Uncharacterized protein conserved in bacteria. | 0.517 |
| ACPL_5567 | ACPL_5568 | ACPL_5567 | ACPL_5568 | ADP-ribose 1''-phosphate phosphatase; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | DNA-directed RNA polymerase II subunit RPB1. | 0.543 |
| ACPL_5567 | ACPL_6096 | ACPL_5567 | ACPL_6096 | ADP-ribose 1''-phosphate phosphatase; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | Nucleoporin; PPE-repeat proteins. | 0.468 |
| ACPL_5567 | ACPL_7468 | ACPL_5567 | ACPL_7468 | ADP-ribose 1''-phosphate phosphatase; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | Hypothetical protein. | 0.476 |
| ACPL_5567 | ACPL_7943 | ACPL_5567 | ACPL_7943 | ADP-ribose 1''-phosphate phosphatase; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | Uncharacterized protein; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | 0.501 |
| ACPL_5567 | g7c | ACPL_5567 | ACPL_4109 | ADP-ribose 1''-phosphate phosphatase; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | Protein G7c. | 0.524 |
| ACPL_5567 | galC | ACPL_5567 | ACPL_3688 | ADP-ribose 1''-phosphate phosphatase; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | Galactosylceramidase; O-Glycosyl hydrolase. | 0.678 |
| ACPL_5567 | galC-2 | ACPL_5567 | ACPL_6175 | ADP-ribose 1''-phosphate phosphatase; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | Galactosylceramidase; Beta-xylosidase. | 0.675 |
| ACPL_5567 | kptA | ACPL_5567 | ACPL_245 | ADP-ribose 1''-phosphate phosphatase; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | Putative RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.594 |
| ACPL_5568 | ACPL_5567 | ACPL_5568 | ACPL_5567 | DNA-directed RNA polymerase II subunit RPB1. | ADP-ribose 1''-phosphate phosphatase; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | 0.543 |
| ACPL_6096 | ACPL_5567 | ACPL_6096 | ACPL_5567 | Nucleoporin; PPE-repeat proteins. | ADP-ribose 1''-phosphate phosphatase; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | 0.468 |
| ACPL_6096 | g7c | ACPL_6096 | ACPL_4109 | Nucleoporin; PPE-repeat proteins. | Protein G7c. | 0.729 |
page 1 of 2