STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5573Galactose oxidase. (649 aa)    
Predicted Functional Partners:
ACPL_5572
Glycosyltransferases, probably involved in cell wall biogenesis.
   
 0.952
ACPL_3252
Putative xyloglucan glycosyltransferase 9; Glycosyltransferases, probably involved in cell wall biogenesis.
   
 0.779
ACPL_3443
Putative mannan synthase 4; Glycosyltransferases, probably involved in cell wall biogenesis.
 
   
 0.708
ACPL_5000
Hypothetical protein.
  
     0.559
ACPL_5574
Antibiotic transport system ATP-binding protein; ABC-type sugar transport systems, ATPase components.
       0.523
drrB
Daunorubicin resistance transmembrane protein; ABC-type multidrug transport system, permease component.
       0.523
ACPL_3978
Putative integral membrane protein.
  
     0.499
ACPL_864
Putative zinc protease; Predicted Zn-dependent peptidases.
  
     0.497
acbZ
Alpha-amylase; Glycosidases; Belongs to the glycosyl hydrolase 13 family.
   
    0.494
acbE
Acarbose resistent alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
   
    0.494
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.