STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
afsR-3Regulatory protein afsR; Predicted ATPase. (1022 aa)    
Predicted Functional Partners:
nadR
Transcriptional regulator nadR; FAD synthase.
   
    0.820
ACPL_5577
Putative secreted endoglucanase; Cellobiohydrolase A (1,4-beta-cellobiosidase A); Belongs to the glycosyl hydrolase family 6.
       0.697
ACPL_5578
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); FOG: GGDEF domain.
  
    0.551
ACPL_2347
Transcriptional regulator, PadR-like family; Predicted transcriptional regulators.
  
    0.547
modR
Regulatory protein afsR.
  
     0.504
ACPL_1235
Transcriptional regulator, PadR-like family.
  
    0.485
ACPL_4213
Hypothetical protein; FOG: TPR repeat.
  
   
 0.471
afsR-2
Regulatory protein afsR; Predicted ATPase.
  
   
0.457
ACPL_4957
Hypothetical protein.
  
     0.449
ACPL_3701
HTH-type transcriptional activator rhaS; AraC-type DNA-binding domain-containing proteins.
  
    0.434
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.