STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msmKSpermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily. (431 aa)    
Predicted Functional Partners:
malG-2
ABC-type maltose transport systems, permease component.
 
 0.997
ACPL_1942
Putative ABC transporter permease protein yurM; ABC-type sugar transport system, permease component.
 0.996
dasC
ABC-type sugar transport system, permease component.
 0.996
ACPL_6094
ABC-type sugar transport systems, permease components.
 
 0.986
yurM
Putative ABC transporter permease protein yurM; ABC-type sugar transport system, permease component.
 
 0.976
frlN
ABC-type sugar transport systems, permease components.
 
 0.976
ACPL_6093
Putative ABC transporter permease protein yurM; ABC-type sugar transport system, permease component.
 
 0.974
ACPL_3871
ABC-type sugar transport systems, permease components.
 
 0.973
dasB
ABC-type sugar transport systems, permease components.
 
 0.972
dasB-2
ABC-type sugar transport systems, permease components.
 
 0.971
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.