STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bgaBeta-galactosidase. (667 aa)    
Predicted Functional Partners:
rafA
Glycoside hydrolase clan GH-D; Alpha-galactosidase.
 
  
 0.970
ACPL_6037
Ricin B lectin; O-Glycosyl hydrolase.
  
 
 0.909
galM
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.908
yihR
Aldose 1-epimerase; Galactose mutarotase and related enzymes.
  
 
 0.908
ACPL_3009
Ricin B lectin; Alpha-galactosidase.
    
 0.906
bga-2
Beta-galactosidase.
  
  
 
0.905
ACPL_5424
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
    
  0.902
ACPL_2998
Hypothetical protein.
     
  0.900
ACPL_5583
Putative arabinose-binding protein; ABC-type sugar transport system, periplasmic component.
 
   
 0.888
ACPL_5585
ABC-type sugar transport systems, permease components.
 
    0.784
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.