Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
ACPL_5583Putative arabinose-binding protein; ABC-type sugar transport system, periplasmic component. (448 aa)    
Predicted Functional Partners:
ACPL_5585
ABC-type sugar transport systems, permease components.
 
  0.996
ACPL_5584
ABC-type sugar transport system, permease component.
 
 0.964
ACPL_7017
L-arabinose transport system permease protein araQ.
 
 0.892
bga
Beta-galactosidase.
 
     0.887
msmK
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
 0.883
msiK
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
 0.883
ACPL_6726
ABC-type sugar transport systems, permease components.
 
  0.876
ACPL_5426
ABC-type sugar transport systems, permease components.
 
  0.868
ACPL_6725
Putative ABC transporter permease protein yesQ; ABC-type sugar transport system, permease component.
 
 0.866
ACPL_5427
Putative ABC transporter permease protein yurM; ABC-type sugar transport system, permease component.
 
 0.853
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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