STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5588Hypothetical protein. (183 aa)    
Predicted Functional Partners:
ACPL_5589
Carotenoid cleavage dioxygenase; Lignostilbene-alpha,beta-dioxygenase and related enzymes.
 
     0.757
ACPL_3796
Hypothetical protein; Predicted ATPase.
  
     0.731
ACPL_5587
Predicted transcriptional regulators.
 
     0.712
ACPL_4453
Hypothetical protein; Hydrolases of the alpha/beta superfamily.
 
     0.634
tetR-11
Tetracycline repressor protein class H; Transcriptional regulator.
  
     0.612
ACPL_682
Hypothetical protein; Ketosteroid isomerase homolog.
  
     0.607
ACPL_4495
Hypothetical protein.
  
     0.540
ACPL_2847
Transcriptional regulators.
  
     0.538
ACPL_2729
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.
  
     0.537
ACPL_5944
Putative mobilization relaxase component.
  
     0.529
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.