STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctpACation transport ATPase. (757 aa)    
Predicted Functional Partners:
ACPL_5598
Hypothetical protein.
 
   
 0.840
copZ
Cation-transporting ATPase pacS.
 
 
 0.838
ACPL_3713
Cation-transporting ATPase pacS.
 
 
 0.833
ACPL_5597
Transcriptional regulator.
       0.584
ACPL_711
Copper-sensing transcriptional repressor csoR; Uncharacterized protein conserved in bacteria.
 
  
 0.519
ACPL_5596
3-oxoacyl-[acyl-carrier-protein] reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.447
ACPL_3714
Hypothetical protein.
   
 0.445
ACPL_5595
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.436
ACPL_3970
Cation transport ATPase.
 
 
0.435
ACPL_1906
Cu/Zn superoxide dismutase.
    
 0.430
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.