STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5615Endoglucanase H; Beta-mannanase; Belongs to the glycosyl hydrolase 26 family. (353 aa)    
Predicted Functional Partners:
ACPL_913
Hypothetical protein.
 
     0.786
ACPL_904
Carbohydrate sulfotransferase 4.
  
     0.760
ACPL_912
Hypothetical protein.
 
     0.756
ACPL_911
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3.
 
     0.743
ACPL_2488
Hypothetical protein.
  
     0.713
ACPL_910
Membrane protein involved in the export of O-antigen and teichoic acid.
 
     0.686
ACPL_1464
Hypothetical protein.
  
     0.674
ACPL_2487
Collagen alpha-4(VI) chain; PPE-repeat proteins.
  
     0.672
ACPL_1313
PKD domain containing protein.
  
     0.669
ACPL_814
Hypothetical protein.
  
     0.655
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.