STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5632Collagen alpha-4(VI) chain; ATPases involved in chromosome partitioning. (661 aa)    
Predicted Functional Partners:
ACPL_4537
HTH-type transcriptional regulator malT; Predicted ATPase.
  
     0.530
ACPL_5510
Uncharacterized protein.
  
     0.509
ACPL_5631
Hypothetical protein.
       0.508
ACPL_2381
Hypothetical protein.
  
     0.482
ACPL_3796
Hypothetical protein; Predicted ATPase.
  
 
 
 0.456
acbS
Glycosyltransferase.
  
     0.417
ACPL_1693
Nucleotide binding protein 1; ATPases involved in chromosome partitioning.
  
     0.415
ACPL_1604
ATPase family gene 2 protein; ATPases of the AAA+ class.
   
 0.412
ACPL_2225
ATPase central domain-containing protein; ATPases of the AAA+ class.
   
 0.412
ACPL_2853
Putative AAA domain-containing protein; ATPases of the AAA+ class.
   
 0.412
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.