STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5646Similar to mitochondrial MOSC domain-containing protein 1; Uncharacterized Fe-S protein. (273 aa)    
Predicted Functional Partners:
ACPL_7818
Hypothetical protein.
   
 
 0.711
ACPL_5645
Putative signaling protein; FOG: GGDEF domain.
       0.576
ACPL_5647
Hypothetical protein.
       0.545
ACPL_5644
Kynurenine 3-monooxygenase; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
       0.515
ACPL_5643
Hypothetical protein.
       0.508
wzc-2
Receptor protein-tyrosine kinase; ATPases involved in chromosome partitioning.
       0.499
ndhD
NAD(P)H-quinone oxidoreductase chain 4; Similar to chloroplast protein; Membrane protein involved in the export of O-antigen and teichoic acid.
       0.499
ACPL_5641
Putative lipopolysaccharide biosynthesis protein; Lipid A core - O-antigen ligase and related enzymes.
       0.499
ACPL_5642
Hypothetical protein.
       0.499
ACPL_5636
Putative polysaccharide deacetylase yxkH; Predicted xylanase/chitin deacetylase.
       0.475
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.