STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbAABC-type polysaccharide/polyol phosphate export systems, permease component. (300 aa)    
Predicted Functional Partners:
tagH
ABC transporter ATP-binding protein; ABC-type sugar transport systems, ATPase components.
 
 0.999
ACPL_7301
Glucomannan 4-beta-mannosyltransferase 2; Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.613
ACPL_7298
Polypeptide N-acetylgalactosaminyltransferase 5; Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.602
ACPL_8311
Uncharacterized protein.
     
 0.593
ACPL_2131
Polypeptide N-acetylgalactosaminyltransferase 6; Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.588
ACPL_1195
Hypothetical protein.
  
  
 0.583
ACPL_132
Hypothetical protein.
  
  
 0.583
ACPL_4439
Hypothetical protein.
  
  
 0.583
ACPL_6239
Hypothetical protein.
  
  
 0.583
amsB
Amylovoran biosynthesis glycosyltransferase amsB; Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.563
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.