STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_566ydeS-like uncharacterized HTH-type transcriptional regulator; Transcriptional regulator. (189 aa)    
Predicted Functional Partners:
ACPL_567
Hypothetical protein.
       0.668
nadR
Transcriptional regulator nadR; FAD synthase.
  
  
 0.628
pnuC
Nicotinamide mononucleotide transporter.
       0.604
ACPL_570
Hypothetical protein.
       0.567
tagH
ABC transporter ATP-binding protein; ABC-type sugar transport systems, ATPase components.
  
    0.517
rfbA
ABC-type polysaccharide/polyol phosphate export systems, permease component.
       0.502
tcmR-3
Transcriptional regulator.
  
     0.430
ACPL_5597
Transcriptional regulator.
  
     0.428
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.