STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5663Abortive infection protein; Predicted metal-dependent membrane protease. (203 aa)    
Predicted Functional Partners:
ACPL_7023
Predicted membrane protein.
 
     0.721
ACPL_590
Predicted integral membrane protein.
  
     0.648
ACPL_4558
Predicted integral membrane protein.
  
     0.586
ACPL_5662
Putative multidrug resistance protein mdtD; Permeases of the major facilitator superfamily.
       0.488
ACPL_6585
Hypothetical protein.
  
     0.478
ACPL_868
Uncharacterized protein; Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
  
     0.475
ACPL_3101
Protein involved in cellulose biosynthesis (CelD).
  
     0.465
pepQ
Xaa-Pro aminopeptidase.
 
     0.428
ACPL_483
Hypothetical protein.
  
     0.407
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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