Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ACPL_6805 | ACPL_6806 | yhcZ-like uncharacterized transcriptional regulatory protein; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Signal transduction histidine kinase. | 0.951 |
ACPL_6805 | ACPL_6807 | yhcZ-like uncharacterized transcriptional regulatory protein; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Hypothetical protein. | 0.639 |
ACPL_6805 | ACPL_6808 | yhcZ-like uncharacterized transcriptional regulatory protein; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Hypothetical protein. | 0.586 |
ACPL_6805 | ACPL_6809 | yhcZ-like uncharacterized transcriptional regulatory protein; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Hypothetical protein. | 0.409 |
ACPL_6806 | ACPL_6805 | Signal transduction histidine kinase. | yhcZ-like uncharacterized transcriptional regulatory protein; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.951 |
ACPL_6806 | ACPL_6807 | Signal transduction histidine kinase. | Hypothetical protein. | 0.817 |
ACPL_6806 | ACPL_6808 | Signal transduction histidine kinase. | Hypothetical protein. | 0.790 |
ACPL_6806 | ACPL_6809 | Signal transduction histidine kinase. | Hypothetical protein. | 0.547 |
ACPL_6807 | ACPL_6805 | Hypothetical protein. | yhcZ-like uncharacterized transcriptional regulatory protein; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.639 |
ACPL_6807 | ACPL_6806 | Hypothetical protein. | Signal transduction histidine kinase. | 0.817 |
ACPL_6807 | ACPL_6808 | Hypothetical protein. | Hypothetical protein. | 0.922 |
ACPL_6807 | ACPL_6809 | Hypothetical protein. | Hypothetical protein. | 0.547 |
ACPL_6808 | ACPL_6805 | Hypothetical protein. | yhcZ-like uncharacterized transcriptional regulatory protein; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.586 |
ACPL_6808 | ACPL_6806 | Hypothetical protein. | Signal transduction histidine kinase. | 0.790 |
ACPL_6808 | ACPL_6807 | Hypothetical protein. | Hypothetical protein. | 0.922 |
ACPL_6808 | ACPL_6809 | Hypothetical protein. | Hypothetical protein. | 0.544 |
ACPL_6809 | ACPL_6805 | Hypothetical protein. | yhcZ-like uncharacterized transcriptional regulatory protein; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.409 |
ACPL_6809 | ACPL_6806 | Hypothetical protein. | Signal transduction histidine kinase. | 0.547 |
ACPL_6809 | ACPL_6807 | Hypothetical protein. | Hypothetical protein. | 0.547 |
ACPL_6809 | ACPL_6808 | Hypothetical protein. | Hypothetical protein. | 0.544 |