STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF80232.1Glycosyltransferase (GT2). (293 aa)    
Predicted Functional Partners:
CDF80010.1
Glycosyltransferase (GT2).
  
  
  0.732
CDF80639.1
Glycosyltransferase (GT2).
  
  
  0.688
CDF79684.1
Trehalose-6-phosphate synthase/phosphatase (GT20).
  
 
  0.650
CDF80627.1
Glycosyltransferase (GT2).
  
  
  0.633
BN863_2110
Polysaccharide deacetylase (CE4).
  
 
 0.606
CDF80231.1
Glycosyltransferase (GT2).
    
  0.544
CDF80075.1
Glycosyltransferase (GT2).
  
  
  0.525
CDF80230.1
WxcM-like domain-containing protein.
 
     0.512
BN863_5470
Conserved hypothetical protein.
  
 
  0.433
CDF80976.1
Tetratricopeptide repeat family protein.
   
 
 0.432
Your Current Organism:
Formosa agariphila
NCBI taxonomy Id: 1347342
Other names: Bacteroidetes bacterium KMM 3901, F. agariphila KMM 3901, Formosa agariphila KMM 3901
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.